BMIRDS Datasets
Datasets
- Dartmouth Lung Cancer Histology Dataset
- MHIST: A Minimalist Histopathology Image Analysis Dataset
- Dartmouth Kidney Cancer Histology Dataset
Dartmouth Lung Cancer Histology Dataset
Dartmouth Lung Cancer Histology Dataset comprises 143 hematoxylin and eosin (H&E)-stained formalin-fixed paraffin-embedded (FFPE) whole-slide images of lung adenocarcinoma from the Department of Pathology and Laboratory Medicine at Dartmouth-Hitchcock Medical Center (DHMC). This dataset contains whole-slide images in .tif image format, which were scanned by an Aperio AT2 whole-slide scanner at 20x or 40x magnification and converted to Generic tiled Pyramidal TIFF format.
MHIST: A Minimalist Histopathology Image Analysis Dataset
MHIST comprises 3,152 hematoxylin and eosin (H&E)-stained Formalin Fixed Paraffin-Embedded (FFPE) fixed-size images (224 by 224 pixels) of colorectal polyps from the Department of Pathology and Laboratory Medicine at Dartmouth-Hitchcock Medical Center (DHMC). Classes in the dataset indicate the predominant histological pattern of each image. MHIST Classification task focuses on the clinically-important binary distinction between Hyperplastic Polyps (HPs) and Sessile Serrated Adenomas (SSAs), a challenging problem with considerable inter-pathologist variability.
Dartmouth Kidney Cancer Histology Dataset
Dartmouth Kidney Cancer Histology Dataset comprises 563 hematoxylin and eosin (H&E)-stained formalin-fixed paraffin-embedded (FFPE) whole-slide images of renal cell carcinoma (RCC) from the Department of Pathology and Laboratory Medicine at Dartmouth-Hitchcock Medical Center (DHMC). In addition to surgical resection slides, this dataset includes biopsy slides that were used as an extended test set in our work.
